2023

Matthew F. Allan, Ph.D.

Thesis Title: Investigating and Reprogramming RNA Folding with Molecular Probes Publications While at MIT: Lan TCT, Allan MF, Malsick LE, Woo JZ, Zhu C, Zhang F, Khandwala S, Nyeo SSY, Sun Y, Guo JU, Bathe M, Näär A, Griffiths A, Rouskin S.Nat Commun. 2022 Mar 2;13(1):1128. doi: 10.1038/s41467-022-28603-2.PMID: 35236847 Free PMC article. 2. Discovery and Quantification of Long-Range…
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Adam Atanas, Ph.D.

Ph.D. Thesis Title: Brain-wide representations of behavior spanning multiple timescales and states in C.elegans MIT Gradaute Publications: Dissecting the functional organization of the C. elegans serotonergic system at whole-brain scale. Dag U, Nwabudike I, Kang D, Gomes MA, Kim J, Atanas AA, Bueno E, Estrem C, Pugliese S, Wang Z, Towlson E, Flavell SW.Cell. 2023 May 10:S0092-8674(23)00419-1.…
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Alexander Po-Yen Wu, Ph.D.

Ph.D. Thesis Title: Towards causality in gene regulatory network inference. MIT Graduate Publications: Bayesian information sharing enhances detection of regulatory associations in rare cell types. Wu AP, Peng J, Berger B, Cho H.Bioinformatics. 2021 Jul 12;37(Suppl_1):i349-i357. doi: 10.1093/bioinformatics/btab269.PMID: 34252956 Free PMC article Structural and functional properties of mSWI/SNF chromatin remodeling complexes revealed through single-cell perturbation screens. Otto…
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